GeneGA: Design gene based on both mRNA secondary structure and codon usage bias using Genetic algorithm

R based Genetic algorithm for gene expression optimization by considering both mRNA secondary structure and codon usage bias, GeneGA includes the information of highly expressed genes of almost 200 genomes. Meanwhile, Vienna RNA Package is needed to ensure GeneGA to function properly.

Package details

AuthorZhenpeng Li and Haixiu Huang
Bioconductor views GeneExpression
MaintainerZhenpeng Li <>
LicenseGPL version 2
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))


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GeneGA documentation built on Nov. 8, 2020, 8:17 p.m.