Test two sets of gene lists and visualize the results.
|Author||Li Shen, Mount Sinai <email@example.com>|
|Date of publication||None|
|Maintainer||Li Shen, Mount Sinai <firstname.lastname@example.org>|
drawHeatmap: Visualize GeneOverlapMatrix objects as heatmaps
GeneOverlap: Test overlap between two gene lists using Fisher's exact...
GeneOverlapMatrix: Matrix representation of the pairwise overlaps between two...
GeneOverlap-package: Test and visualize overlaps between gene lists
getGenomeSize: Accessors for the "genome.size" slot of the GeneOverlap class
getList: Accessors for the "listA" and "listB" slots of GeneOverlap...
getReadonly: Read-only accessors for the "intersection", "union",...
getReadonlyMatrix: Read-only accessors for the various slots of the...
gs.RNASeq: Genome size based on RNA-seq data
hESC.ChIPSeq.list: ChIP-seq gene lists
hESC.RNASeq.list: RNA-seq gene lists
newGeneOverlap: Constructor for the GeneOverlap class
newGOM: Constructor for the GeneOverlapMatrix class
testGeneOverlap: Test function for the GeneOverlap class