GeneSelectMMD: Gene selection based on the marginal distributions of gene profiles that characterized by a mixture of three-component multivariate distributions

Gene selection based on a mixture of marginal distributions

Author
Jarrett Morrow <remdj@channing.harvard.edu>, Weiliang Qiu <stwxq@channing.harvard.edu>, Wenqing He <whe@stats.uwo.ca>, Xiaogang Wang <stevenw@mathstat.yorku.ca>, Ross Lazarus <ross.lazarus@channing.harvard.edu>.
Date of publication
None
Maintainer
Weiliang Qiu <stwxq@channing.harvard.edu>
License
GPL (>= 2)
Version
2.18.0

View on Bioconductor

Man pages

errRates
Calculating FDR, FNDR, FPR, and FNR for a real microarray...
gsMMD
Gene selection based on a mixture of marginal distributions
gsMMD2
Gene selection based on a mixture of marginal distributions
gsMMD2.default
Gene selection based on a mixture of marginal distributions
gsMMD.default
Gene selection based on a mixture of marginal distributions
obtainResi
Replace expression levels by the residuals of regression...
plotHistDensity
Plot of histogram and density estimate of the pooled gene...

Files in this package

GeneSelectMMD/DESCRIPTION
GeneSelectMMD/INDEX
GeneSelectMMD/NAMESPACE
GeneSelectMMD/R
GeneSelectMMD/R/checkPara.R
GeneSelectMMD/R/errRates.R
GeneSelectMMD/R/getPara.R
GeneSelectMMD/R/getResiduals.R
GeneSelectMMD/R/gsMMD.R
GeneSelectMMD/R/gsMMD2.R
GeneSelectMMD/R/iniMemGenesTestFunc.R
GeneSelectMMD/R/myWilcox.R
GeneSelectMMD/R/paraEst.R
GeneSelectMMD/R/trans.R
GeneSelectMMD/R/visual.R
GeneSelectMMD/build
GeneSelectMMD/build/vignette.rds
GeneSelectMMD/inst
GeneSelectMMD/inst/doc
GeneSelectMMD/inst/doc/gsMMD.R
GeneSelectMMD/inst/doc/gsMMD.Rnw
GeneSelectMMD/inst/doc/gsMMD.pdf
GeneSelectMMD/man
GeneSelectMMD/man/errRates.Rd
GeneSelectMMD/man/gsMMD.Rd
GeneSelectMMD/man/gsMMD.default.Rd
GeneSelectMMD/man/gsMMD2.Rd
GeneSelectMMD/man/gsMMD2.default.Rd
GeneSelectMMD/man/obtainResi.Rd
GeneSelectMMD/man/plotHistDensity.Rd
GeneSelectMMD/src
GeneSelectMMD/src/Qfunc.f
GeneSelectMMD/src/blas.f
GeneSelectMMD/src/isnan.c
GeneSelectMMD/src/lbfgsb.f
GeneSelectMMD/src/lbfgsbDriver.f
GeneSelectMMD/src/linpack.f
GeneSelectMMD/src/llkhFun.f
GeneSelectMMD/src/myTtest.f
GeneSelectMMD/src/paraEstLoop.f
GeneSelectMMD/src/pt.c
GeneSelectMMD/src/timer.f
GeneSelectMMD/src/wiFun.f
GeneSelectMMD/vignettes
GeneSelectMMD/vignettes/GS207runTimesSim1k.pdf
GeneSelectMMD/vignettes/GeneSelectMMD.bib
GeneSelectMMD/vignettes/gsMMD.Rnw