| check | Check consistency of data in pedigree |
| datasets | Pedigree and data examples |
| extend | Extend pedigree |
| family | Find families (lines) in the pedigree |
| founder | Founder and non-founder individuals in the pedigree |
| geneContribution | Gene contribution or proportion of genes in pedigree by... |
| generatePedigree | Generate Pedigree example |
| generation | Calculate generation value |
| gpi | Genotype probability index |
| gpiUtil | Utility functions for gpi() |
| inbreeding | Inbreeding coefficient |
| model.matrix | Model matrix for individuals with and without records |
| nIndividual | Number of individuals in a pedigree |
| pedigree | Pedigree |
| prune | Prune pedigree |
| relationshipAdditive | Additive relationship matrix and its inverse |
| removeIndividual | Remove individual from pedigree |
| sort.pedigree | Sort pedigree |
| summary.pedigree | Pedigree summary |
| TDT | Gene and gamete flow matrices |
| undocumented | Undocumented functions |
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