Man pages for GenomeInfoDb
Utilities for manipulating chromosome names, including modifying them to follow a particular naming style

fetchExtendedChromInfoFromUCSCFetching chromosomes info for some of the UCSC genomes
GenomeDescription-classGenomeDescription objects
GenomeInfoDb-internalsGenomeInfoDb internals
getChromInfoFromEnsemblGet chromosome information for an Ensembl species
getChromInfoFromNCBIGet chromosome information for an NCBI assembly
getChromInfoFromUCSCGet chromosome information for a UCSC genome
loadTaxonomyDbReturn a data.frame that lists the known taxonomy IDs and...
mapGenomeBuildsMapping between UCSC and Ensembl Genome Builds
rankSeqlevelsAssign sequence IDs to sequence names
seqinfoAccessing/modifying sequence information
Seqinfo-classSeqinfo objects
seqlevelsStyleConveniently rename the seqlevels of an object according to a...
seqlevels-wrappersConvenience wrappers to the seqlevels() getter and setter
GenomeInfoDb documentation built on April 9, 2021, 6 p.m.