GoogleGenomics: R Client for Google Genomics API

Provides an R package to interact with the Google Genomics API.

Install the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("GoogleGenomics")
AuthorCassie Doll [aut], Nicole Deflaux [aut], Siddhartha Bagaria [aut, cre]
Bioconductor views DataImport Genetics ThirdPartyClient
Date of publicationNone
MaintainerSiddhartha Bagaria <sidb@google.com>
LicenseApache License (== 2.0) | file LICENSE
Version1.8.0
https://cloud.google.com/genomics/

View on Bioconductor

Files

DESCRIPTION
LICENSE
NAMESPACE
NEWS
R
R/GoogleGenomics.R R/authenticate.R R/client.R R/reads.R R/variants.R R/zzz.R
build
build/vignette.rds
inst
inst/doc
inst/doc/AnnotatingVariants.R
inst/doc/AnnotatingVariants.Rmd
inst/doc/AnnotatingVariants.html
inst/doc/PlottingAlignments.R
inst/doc/PlottingAlignments.Rmd
inst/doc/PlottingAlignments.html
inst/doc/VariantAnnotation-comparison-test.R
inst/doc/VariantAnnotation-comparison-test.Rmd
inst/doc/VariantAnnotation-comparison-test.html
inst/doc/figure
man
man/GoogleGenomics.Rd man/authenticate.Rd man/getReads.Rd man/getReadsPage.Rd man/getSearchPage.Rd man/getVariantCalls.Rd man/getVariants.Rd man/getVariantsPage.Rd man/readsToGAlignments.Rd man/variantsToGRanges.Rd man/variantsToVRanges.Rd
tests
tests/runTests.R
tests/testthat
tests/testthat/test-getReads.R tests/testthat/test-getVariantCalls.R tests/testthat/test-getVariants.R
vignettes
vignettes/AnnotatingVariants.Rmd
vignettes/PlottingAlignments.Rmd
vignettes/VariantAnnotation-comparison-test.Rmd

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

Please suggest features or report bugs with the GitHub issue tracker.

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