Corrects GC and mappability biases for readcounts (i.e. coverage) in non-overlapping windows of fixed length for single whole genome samples, yielding a rough estimate of copy number for furthur analysis. Designed for rapid correction of high coverage whole genome tumour and normal samples.
|Author||Daniel Lai, Gavin Ha, Sohrab Shah|
|Bioconductor views||CopyNumberVariation Microarray Preprocessing Sequencing Visualization|
|Maintainer||Daniel Lai <[email protected]>, Sohrab Shah <[email protected]>|
|Package repository||View on Bioconductor|
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