HelloRanges: Introduce *Ranges to bedtools users

Translates bedtools command-line invocations to R code calling functions from the Bioconductor *Ranges infrastructure. This is intended to educate novice Bioconductor users and to compare the syntax and semantics of the two frameworks.

Package details

AuthorMichael Lawrence
Bioconductor views Annotation Coverage DataImport GenomeAnnotation SequenceMatching Sequencing VariantAnnotation
MaintainerMichael Lawrence <michafla@gene.com>
LicenseGPL (>= 2)
Version1.16.0
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("HelloRanges")

Try the HelloRanges package in your browser

Any scripts or data that you put into this service are public.

HelloRanges documentation built on Nov. 8, 2020, 7:05 p.m.