SaveEnvironments: Export Conda environment.

In Herper: The Herper package is a simple toolset to install and manage conda packages and environments from R

Description

Export Conda environment

Import Conda environment

Usage

export_CondaEnv(
  env_name,
  yml_export = NULL,
  pathToMiniConda = NULL,
  depends = TRUE
)

import_CondaEnv(
  yml_import,
  name = NULL,
  pathToMiniConda = NULL,
  install = TRUE,
  channels = NULL
)

Arguments

env_name	Name of environment you want to save
yml_export	Destination for exported environment yml file
pathToMiniConda	NULL Path to miniconda installation
depends	if FALSE will only include packages explicitly installed and not dependencies
yml_import	conda environment yml file
name	Name of the environment to create.
install	TRUE/FALSE whether to install miniconda at path if it doesn't exist.
channels	Additional channels for miniconda (bioconda defaults and conda-forge are included automatically)

Value

Nothing returned. Output written to file.

Nothing returned. Output written to file.

Author(s)

Matt Paul

Matt Paul

Examples

testYML <- system.file("extdata/HerperTestPkg_0.1.0.yml", package = "Herper")
condaDir <- file.path(tempdir(), "r-miniconda")
import_CondaEnv(testYML, "herper_test", pathToMiniConda = condaDir)
export_CondaEnv("herper_test", yml_export = tempfile(), pathToMiniConda = condaDir)

Herper documentation built on Feb. 28, 2021, 2:02 a.m.