Brick_list_matrix_mcols: List the matrix metadata columns in the Brick store.

In HiCBricks: Framework for Storing and Accessing Hi-C Data Through HDF Files

Description

Brick_get_matrix_mcols will list the names of all matrix metadata columns.

Usage

Brick_list_matrix_mcols()

Value

Returns a vector containing the names of all matrix metadata columns

Examples

Bintable.path <- system.file(file.path("extdata", "Bintable_100kb.bins"), 
package = "HiCBricks")

out_dir <- file.path(tempdir(), "list_matrix_mcols_test")
dir.create(out_dir)

My_BrickContainer <- Create_many_Bricks(BinTable = Bintable.path, 
    bin_delim = " ", output_directory = out_dir, file_prefix = "Test",
    experiment_name = "Vignette Test", resolution = 100000,
    remove_existing = TRUE)

Brick_list_matrix_mcols()

HiCBricks documentation built on Nov. 8, 2020, 7:45 p.m.