Files in IMAS

Integrative analysis of Multi-omics data for Alternative Splicing

README.md

NEWS

NAMESPACE

DESCRIPTION

build/vignette.rds

data/bamfilestest.rda

data/sampleclinical.rda

data/samplemethyllocus.rda

data/samplesnplocus.rda

data/samplesnp.rda

data/samplemethyl.rda

data/sampleGroups.rda

R/SplicingReads.R R/ExonsCluster.R R/CompGroupAlt.R R/ASvisualization.R R/MEsQTLFinder.R R/RatioFromReads.R R/ClinicAnalysis.R

vignettes/IMAS.Rnw

vignettes/img/ES3.pdf man/samplesnp.Rd man/MEsQTLFinder.Rd man/GroupSam.Rd man/samplebamfiles.Rd man/ClinicAnalysis.Rd man/sampleMedata.Rd man/ExonsCluster.Rd man/ASvisualization.Rd man/samplesnplocus.Rd man/sampleMelocus.Rd man/Clinical.data.Rd man/SplicingReads.Rd man/IMAS-package.Rd man/CompGroupAlt.Rd man/RatioFromReads.Rd tests/runTests.R inst/doc/IMAS.R inst/doc/IMAS.pdf

inst/doc/IMAS.Rnw

inst/extdata/sampleDB

inst/extdata/samplebam/srt.BreastPatient_30.bam.bai

inst/extdata/samplebam/srt.BreastPatient_45.bam

inst/extdata/samplebam/srt.BreastPatient_45.bam.bai

inst/extdata/samplebam/srt.BreastPatient_40.bam

inst/extdata/samplebam/srt.BreastPatient_6.bam.bai

inst/extdata/samplebam/srt.BreastPatient_10.bam.bai

inst/extdata/samplebam/srt.BreastPatient_25.bam.bai

inst/extdata/samplebam/srt.BreastPatient_8.bam

inst/extdata/samplebam/srt.BreastPatient_35.bam.bai

inst/extdata/samplebam/srt.BreastPatient_5.bam.bai

inst/extdata/samplebam/srt.BreastPatient_48.bam

inst/extdata/samplebam/srt.BreastPatient_19.bam

inst/extdata/samplebam/srt.BreastPatient_50.bam

inst/extdata/samplebam/srt.BreastPatient_8.bam.bai

inst/extdata/samplebam/srt.BreastPatient_37.bam

inst/extdata/samplebam/srt.BreastPatient_15.bam

inst/extdata/samplebam/srt.BreastPatient_21.bam.bai

inst/extdata/samplebam/srt.BreastPatient_24.bam.bai

inst/extdata/samplebam/srt.BreastPatient_44.bam

inst/extdata/samplebam/srt.BreastPatient_9.bam

inst/extdata/samplebam/srt.BreastPatient_47.bam.bai

inst/extdata/samplebam/srt.BreastPatient_2.bam

inst/extdata/samplebam/srt.BreastPatient_36.bam

inst/extdata/samplebam/srt.BreastPatient_18.bam.bai

inst/extdata/samplebam/srt.BreastPatient_26.bam

inst/extdata/samplebam/srt.BreastPatient_23.bam

inst/extdata/samplebam/srt.BreastPatient_11.bam

inst/extdata/samplebam/srt.BreastPatient_24.bam

inst/extdata/samplebam/srt.BreastPatient_50.bam.bai

inst/extdata/samplebam/srt.BreastPatient_6.bam

inst/extdata/samplebam/srt.BreastPatient_11.bam.bai

inst/extdata/samplebam/srt.BreastPatient_17.bam

inst/extdata/samplebam/srt.BreastPatient_48.bam.bai

inst/extdata/samplebam/srt.BreastPatient_21.bam

inst/extdata/samplebam/srt.BreastPatient_30.bam

inst/extdata/samplebam/srt.BreastPatient_28.bam.bai

inst/extdata/samplebam/srt.BreastPatient_13.bam

inst/extdata/samplebam/srt.BreastPatient_46.bam

inst/extdata/samplebam/srt.BreastPatient_41.bam

inst/extdata/samplebam/srt.BreastPatient_26.bam.bai

inst/extdata/samplebam/srt.BreastPatient_33.bam.bai

inst/extdata/samplebam/srt.BreastPatient_4.bam.bai

inst/extdata/samplebam/srt.BreastPatient_44.bam.bai

inst/extdata/samplebam/srt.BreastPatient_9.bam.bai

inst/extdata/samplebam/srt.BreastPatient_5.bam

inst/extdata/samplebam/srt.BreastPatient_10.bam

inst/extdata/samplebam/srt.BreastPatient_42.bam

inst/extdata/samplebam/srt.BreastPatient_1.bam

inst/extdata/samplebam/srt.BreastPatient_12.bam.bai

inst/extdata/samplebam/srt.BreastPatient_2.bam.bai

inst/extdata/samplebam/srt.BreastPatient_34.bam.bai

inst/extdata/samplebam/srt.BreastPatient_36.bam.bai

inst/extdata/samplebam/srt.BreastPatient_22.bam

inst/extdata/samplebam/srt.BreastPatient_29.bam.bai

inst/extdata/samplebam/srt.BreastPatient_42.bam.bai

inst/extdata/samplebam/srt.BreastPatient_27.bam

inst/extdata/samplebam/srt.BreastPatient_32.bam

inst/extdata/samplebam/srt.BreastPatient_40.bam.bai

inst/extdata/samplebam/srt.BreastPatient_49.bam

inst/extdata/samplebam/srt.BreastPatient_38.bam

inst/extdata/samplebam/srt.BreastPatient_15.bam.bai

inst/extdata/samplebam/srt.BreastPatient_43.bam

inst/extdata/samplebam/srt.BreastPatient_49.bam.bai

inst/extdata/samplebam/srt.BreastPatient_25.bam

inst/extdata/samplebam/srt.BreastPatient_14.bam.bai

inst/extdata/samplebam/srt.BreastPatient_22.bam.bai

inst/extdata/samplebam/srt.BreastPatient_31.bam

inst/extdata/samplebam/srt.BreastPatient_29.bam

inst/extdata/samplebam/srt.BreastPatient_47.bam

inst/extdata/samplebam/srt.BreastPatient_12.bam

inst/extdata/samplebam/srt.BreastPatient_20.bam.bai

inst/extdata/samplebam/srt.BreastPatient_14.bam

inst/extdata/samplebam/srt.BreastPatient_17.bam.bai

inst/extdata/samplebam/srt.BreastPatient_39.bam.bai

inst/extdata/samplebam/srt.BreastPatient_13.bam.bai

inst/extdata/samplebam/srt.BreastPatient_1.bam.bai

inst/extdata/samplebam/srt.BreastPatient_43.bam.bai

inst/extdata/samplebam/srt.BreastPatient_46.bam.bai

inst/extdata/samplebam/srt.BreastPatient_28.bam

inst/extdata/samplebam/srt.BreastPatient_34.bam

inst/extdata/samplebam/srt.BreastPatient_7.bam

inst/extdata/samplebam/srt.BreastPatient_23.bam.bai

inst/extdata/samplebam/srt.BreastPatient_32.bam.bai

inst/extdata/samplebam/srt.BreastPatient_39.bam

inst/extdata/samplebam/srt.BreastPatient_27.bam.bai

inst/extdata/samplebam/srt.BreastPatient_18.bam

inst/extdata/samplebam/srt.BreastPatient_33.bam

inst/extdata/samplebam/srt.BreastPatient_3.bam.bai

inst/extdata/samplebam/srt.BreastPatient_16.bam

inst/extdata/samplebam/srt.BreastPatient_37.bam.bai

inst/extdata/samplebam/srt.BreastPatient_38.bam.bai

inst/extdata/samplebam/srt.BreastPatient_31.bam.bai

inst/extdata/samplebam/srt.BreastPatient_16.bam.bai

inst/extdata/samplebam/srt.BreastPatient_7.bam.bai

inst/extdata/samplebam/srt.BreastPatient_3.bam

inst/extdata/samplebam/srt.BreastPatient_19.bam.bai

inst/extdata/samplebam/srt.BreastPatient_4.bam

inst/extdata/samplebam/srt.BreastPatient_35.bam

inst/extdata/samplebam/srt.BreastPatient_41.bam.bai

inst/extdata/samplebam/srt.BreastPatient_20.bam

inst/unitTests/test_functions.R

IMAS documentation built on Nov. 8, 2020, 7:48 p.m.