Icens: NPMLE for Censored and Truncated Data

Many functions for computing the NPMLE for censored and truncated data.

Author
R. Gentleman and Alain Vandal
Date of publication
None
Maintainer
Bioconductor Package Maintainer <maintainer@bioconductor.org>
License
Artistic-2.0
Version
1.46.0

View on Bioconductor

Man pages

Bisect
An implementation of the bisection algorithm for root...
BVcliques
Find the bivariate cliques from the marginal data.
BVclmat
Compute the clique matrix from the clique list.
BVsupport
Compute the support for the cliques of a bivariate...
cmv
Data on times to shedding of cytomegalovirus and to...
cosmesis
The time taken until cosmetic deterioration of breast...
EM
A function to compute the NPMLE of p based on the incidence...
EMICM
Compute the NPMLE for censored data using the EMICM.
hiv
Intervals for infection time and disease onset for 257...
Icens-internal
Internal Icens functions
icsurv
The class of objects returned by the estimation routines in...
ISDM
Estimate the NPMLE of censored data using the ISDM method...
Maclist
A function to
Macmat
A function to compute the incidence matrix for an...
MLEintvl
Compute the real representation for the maximal cliques.
PGM
An implementation of the projected gradient methods for...
Plotboxes
Plot the event time regions for bivariate data.
plot.icsurv
A plot method for the estimates produced by the estimation...
PMGA
Implement the pool monotone groups algorithm.
pruitt
A small artificial, bivariate right-censored data set.
VEM
Compute the NPMLE of p via the Vertex Exchange Method.

Files in this package

Icens/DESCRIPTION
Icens/NAMESPACE
Icens/R
Icens/R/censored.R
Icens/R/icmle.R
Icens/TODO
Icens/data
Icens/data/cmv.R
Icens/data/cosmesis.tab
Icens/data/hiv.R
Icens/data/pruitt.R
Icens/inst
Icens/inst/extdata
Icens/inst/extdata/CMVdata
Icens/inst/extdata/Heavy
Icens/inst/extdata/Lightly
Icens/man
Icens/man/BVcliques.Rd
Icens/man/BVclmat.Rd
Icens/man/BVsupport.Rd
Icens/man/Bisect.Rd
Icens/man/EM.Rd
Icens/man/EMICM.Rd
Icens/man/ISDM.Rd
Icens/man/Icens-internal.Rd
Icens/man/MLEintvl.Rd
Icens/man/Maclist.Rd
Icens/man/Macmat.Rd
Icens/man/PGM.Rd
Icens/man/PMGA.Rd
Icens/man/Plotboxes.Rd
Icens/man/VEM.Rd
Icens/man/cmv.Rd
Icens/man/cosmesis.Rd
Icens/man/hiv.Rd
Icens/man/icsurv.Rd
Icens/man/plot.icsurv.Rd
Icens/man/pruitt.Rd
Icens/tests
Icens/tests/testbv.R
Icens/tests/testbv.Rout.save