KEGGREST: Client-side REST access to KEGG

A package that provides a client interface to the KEGG REST server. Based on KEGGSOAP by J. Zhang, R. Gentleman, and Marc Carlson, and KEGG (python package) by Aurelien Mazurie.

Author
Dan Tenenbaum
Date of publication
None
Maintainer
Bioconductor Package Maintainer <maintainer@bioconductor.org>
License
Artistic-2.0
Version
1.14.0

View on Bioconductor

Man pages

keggConv
Convert KEGG identifiers to/from outside identifiers
keggFind
Finds entries with matching query keywords or other query...
keggGet
Retrieves given database entries
keggInfo
Displays the current statistics of a given database
keggLink
Find related entries by using database cross-references.
keggList
Returns a list of entry identifiers and associated definition...
listDatabases
Lists the KEGG databases which may be searched.
mark.pathway.by.objects
Client-side interface to obtain an url for a KEGG pathway...

Files in this package

KEGGREST/DESCRIPTION
KEGGREST/NAMESPACE
KEGGREST/NEWS
KEGGREST/QUESTIONS
KEGGREST/R
KEGGREST/R/KEGGREST.R
KEGGREST/R/parsers.R
KEGGREST/R/test_KEGGREST_package.R
KEGGREST/R/utilities.R
KEGGREST/build
KEGGREST/build/vignette.rds
KEGGREST/inst
KEGGREST/inst/doc
KEGGREST/inst/doc/KEGGREST-vignette.R
KEGGREST/inst/doc/KEGGREST-vignette.Rmd
KEGGREST/inst/doc/KEGGREST-vignette.html
KEGGREST/inst/unitTests
KEGGREST/inst/unitTests/test_KEGGREST.R
KEGGREST/man
KEGGREST/man/keggConv.Rd
KEGGREST/man/keggFind.Rd
KEGGREST/man/keggGet.Rd
KEGGREST/man/keggInfo.Rd
KEGGREST/man/keggLink.Rd
KEGGREST/man/keggList.Rd
KEGGREST/man/listDatabases.Rd
KEGGREST/man/mark.pathway.by.objects.Rd
KEGGREST/tests
KEGGREST/tests/KEGGREST_unit_tests.R
KEGGREST/vignettes
KEGGREST/vignettes/KEGGREST-vignette.Rmd