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KinSwingR integrates phosphosite data derived from mass-spectrometry data and kinase-substrate predictions to predict kinase activity. Several functions allow the user to build PWM models of kinase-subtrates, statistically infer PWM:substrate matches, and integrate these data to infer kinase activity.
Package details |
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Author | Ashley J. Waardenberg [aut, cre] |
Bioconductor views | Network Proteomics SequenceMatching |
Maintainer | Ashley J. Waardenberg <a.waardenberg@gmail.com> |
License | GPL-3 |
Version | 1.8.0 |
Package repository | View on Bioconductor |
Installation |
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