Islam2011: scRNA-seq data from Islam et al. 2011
In Linnorm: Linear model and normality based normalization and transformation method (Linnorm)
Description
Usage
Format
References
Description
GEO accession GSE29087:
92 single cells (48 mouse embryonic stem cells, 44 mouse embryonic fibroblasts and 4 negative controls) were analyzed by single-cell tagged reverse transcription (STRT).
Usage
1
Format
A matrix with 22936 rows (genes) and 96 columns (samples). The first 48 columns are ES cells, the following 44 columns are mouse embryonic fibroblasts and the remaining 4 columns and negative controls. Data is in raw counts format.
References
Islam et al. (2011) Genome Res 2011 Jul;21(7):1160-7. PMID: 21543516
Linnorm documentation built on Nov. 8, 2020, 6:48 p.m.
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Description Usage Format References
Description
GEO accession GSE29087: 92 single cells (48 mouse embryonic stem cells, 44 mouse embryonic fibroblasts and 4 negative controls) were analyzed by single-cell tagged reverse transcription (STRT).
Usage
1 |
Format
A matrix with 22936 rows (genes) and 96 columns (samples). The first 48 columns are ES cells, the following 44 columns are mouse embryonic fibroblasts and the remaining 4 columns and negative controls. Data is in raw counts format.
References
Islam et al. (2011) Genome Res 2011 Jul;21(7):1160-7. PMID: 21543516
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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