Man pages for Logolas
EDLogo Plots Featuring String Logos and Adaptive Scaling of Position-Weight Matrices

aRxivCounts of the aRxiv field categories of 4 UChicago Statistics...
EBF1_disc1EBF1_disc1 transcription factor position weight matrix A...
GetConsensusSeqFunction for obtaining consensus sequence of DNA sequence...
get_logo_heightsGet heights of logos in nlogomaker() under different scoring...
get_plotLogo plot for given co-ordinates and fill values
get_viewport_logoFunction for creating a multi-panel logo viewport
himalayan_faunaProportional abundances of different bird species in the...
histone_marksCompositional data of histone marks in different regions of...
logomakerCreate logo plots from aligned sequences or positional...
logo_pssmFunction to plot PSSM logo plot visualization.
makemylogoLogo maker for a given English alphanumeric with common...
mutation_sigCompositional mutational signature data, with mismatch and...
nlogomakerMain workhorse function that builds negative logo plots
plogomakerMain workhorse function that builds the positive logo plots
pssmPosition specific scoring matrix data A dataset of position...
seqlogo_exampleAn example of the position weight matrix taken from seqLogo...
UMIAn example of the position weight matrix of the bases in the...
Logolas documentation built on Nov. 1, 2018, 5:03 a.m.