Logolas: EDLogo Plots Featuring String Logos and Adaptive Scaling of Position-Weight Matrices

Produces logo plots highlighting both enrichment and depletion of characters, allows for plotting of string symbols, and performs scaling of position-weights adaptively, along with several fun stylizations.

Package details

AuthorKushal Dey [aut, cre], Dongyue Xie [aut], Peter Carbonetto [ctb], Matthew Stephens [aut]
Bioconductor views Alignment Bayesian SequenceMatching Software Visualization
MaintainerKushal Dey <kkdey@uchicago.edu>
LicenseGPL (>= 2)
URL https://github.com/kkdey/Logolas
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))


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Logolas documentation built on April 28, 2020, 8:55 p.m.