M3D: Identifies differentially methylated regions across testing groups
Version 1.10.0

This package identifies statistically significantly differentially methylated regions of CpGs. It uses kernel methods (the Maximum Mean Discrepancy) to measure differences in methylation profiles, and relates these to inter-replicate changes, whilst accounting for variation in coverage profiles.

Package details

AuthorTom Mayo
Bioconductor views Coverage CpGIsland DNAMethylation DifferentialMethylation
MaintainerTom Mayo <t.mayo@ed.ac.uk>
LicenseArtistic License 2.0
Version1.10.0
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("M3D")

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M3D documentation built on May 31, 2017, 3:10 p.m.