MAIT-class: Class '"MAIT"'

In MAIT: Statistical Analysis of Metabolomic Data

Description

MAIT class objects are used in the MAIT package to perform the analysis and statistical calculus of LC/MS data. It has 5 main slots: FeatureInfo, RawData, Validation, PhenoData and FeatureData

Slots

FeatureInfo:

Object of class MAIT.FeatureInfo-class

RawData:

Object of class MAIT.RawData-class

Validation:

Object of class MAIT.Validation-class

PhenoData:

Object of class MAIT.PhenoData-class

FeatureData:

Object of class MAIT.FeatureData-class

Methods

summary

signature(object = "MAIT"): This function show a summary of the workflow results performed so far including the classification results and the parameters used.

model

signature(object = "MAIT"): returns the model for either the PCA, PLS models when functions plotPCA or plotPLS have been already respectively launched.

scores

signature(object = "MAIT"): Retrieves the scores from a MAIT object

loadings

signature(object = "MAIT"): Retrieves the loadings from a MAIT object

Author(s)

Francesc Fernandez, [e-mail]

See Also

xsAnnotate

MAIT documentation built on Nov. 8, 2020, 5:43 p.m.