example_NApattern | Missing value pattern dataset |
getKminmax | Get the k largest/smallest elements |
getPvalue | Calculates Pitman-Morgan variance test on two matrices |
getPXDfile | Download data from PRIDE |
mbqn | Mean/Median-balanced quantile normalization |
mbqnBoxplot | Combined box plot and line plot |
mbqnGetIntersect | Helper function for mbqnGetThreshold |
mbqnGetNRIfeatures | Identify rank invariant (RI) and nearly rank invariant (NRI)... |
mbqnGetThreshold | Calculates the rank invariance threshold from which on MBQN... |
mbqnLoadFile | Load and preprocess LFQ intensities |
mbqnNRI | Selective mean/median-balanced quantile normalization |
mbqnPlotAll | Plot RI/NRI feature frequencies and normalized/unnormalized... |
mbqnPlotRI | Plot frequency of detected RI/NRI features |
mbqnSimuData | Generate a random/structured data matrix |
mbqnSimuDistortion | Perturbation of sample mean and scale |
oneSidedTest | Recalulate p value from two-sided to one-sided |
truncateDecimals | Truncate float to defined number of decimal values |
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