exampleBSDT: A data.table containing DNA methylation data.
In MIRA: Methylation-Based Inference of Regulatory Activity
Description
This object contains reduced
representation bisulfite sequencing data from the
GM06990 B-lymphoblastoid cell line that was generated by the ENCODE
project (GEO accession GSE27584, sample GSM980583). Has columns for
position (chr, start), number methylated reads, and number of reads total.
The sample name is Gm06990_1.
Only a subset of the full data is used in this object and the
data was switched from hg19 to hg38.
Usage
1
Format
A data.table, data.frame object
MIRA documentation built on Nov. 8, 2020, 4:51 p.m.
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Description
This object contains reduced representation bisulfite sequencing data from the GM06990 B-lymphoblastoid cell line that was generated by the ENCODE project (GEO accession GSE27584, sample GSM980583). Has columns for position (chr, start), number methylated reads, and number of reads total. The sample name is Gm06990_1. Only a subset of the full data is used in this object and the data was switched from hg19 to hg38.
Usage
1 |
Format
A data.table, data.frame object
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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