Files in MIRA
Methylation-Based Inference of Regulatory Activity
_pkgdown.yaml
README.md
NEWS
NAMESPACE
DESCRIPTION
build/vignette.rds
data/exampleAnnoDT2.RData
data/datalist
data/exampleBSDT.RData
data/exampleBins.RData
data/exampleRegionSet.RData
data/exampleAnnoDT1.RData
data/bigBinDT2.RData
data/bigBinDT1.RData
data/exampleBSseqObj.RData
R/binning_aggregation.R
R/MIRA.R
R/utility.R
R/plotting.R
R/data.R
vignettes/BiologicalApplication.Rmd
vignettes/GettingStarted.Rmd
man/BSBinAggregate.Rd
man/exampleBSDT.Rd
man/SummarizedExperimentToDataTable.Rd
man/MIRA.Rd
man/plotMIRAProfiles.Rd
man/exampleAnnoDT2.Rd
man/addMethPropCol.Rd
man/exampleRegionSet.Rd
man/BSreadBiSeq.Rd
man/calcMIRAScore.Rd
man/bigBinDT2.Rd
man/exampleBSseqObj.Rd
man/bigBinDT1.Rd
man/exampleBins.Rd
man/binRegion.Rd
man/rbindNamedList.Rd
man/plotMIRAScores.Rd
man/bsseqToDataTable.Rd
man/exampleAnnoDT1.Rd
man/aggregateMethyl.Rd
tests/testthat.R
tests/testthat/test_all.R
inst/CITATION
inst/doc/BiologicalApplication.R
inst/doc/GettingStarted.R
inst/doc/BiologicalApplication.Rmd
inst/doc/GettingStarted.html
inst/doc/BiologicalApplication.html
inst/doc/GettingStarted.Rmd
inst/extdata/shortRRBS.bed
inst/extdata/exampleAnnoDT2.txt
