MSPrep
Package for Summarizing, Filtering, Imputing, and Normalizing Metabolomics Data

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MSPrep: Package for Summarizing, Filtering, Imputing, and Normalizing Metabolomics Data

MSPrep: Package for Summarizing, Filtering, Imputing, and Normalizing Metabolomics Data

Package performs summarization of replicates, filtering by frequency, several different options for imputing missing data, and a variety of options for transforming, batch correcting, and normalizing data.

Getting started

README.md Using MSPrep

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Vignettes Man pages API and functions Files

Package details
AuthorMax McGrath [aut, cre], Matt Mulvahill [aut], Grant Hughes [aut], Sean Jacobson [aut], Harrison Pielke-lombardo [aut], Katerina Kechris [aut, cph, ths]
Bioconductor views MassSpectrometry Metabolomics Preprocessing
MaintainerMax McGrath <max.mcgrath@ucdenver.edu>
LicenseGPL-3
Version1.0.0
URL https://github.com/KechrisLab/MSPrep 
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R: 
if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("MSPrep")

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MSPrep documentation built on Nov. 8, 2020, 5:07 p.m.

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