MSstatsPTM: Statistical Characterization of Post-translational Modifications

MSstatsPTM provides general statistical methods for quantitative characterization of post-translational modifications (PTMs). Typically, the analysis involves the quantification of PTM sites (i.e., modified residues) and their corresponding proteins, as well as the integration of the quantification results. MSstatsPTM provides functions for summarization, estimation of PTM site abundance, and detection of changes in PTMs across experimental conditions.

Package details

AuthorTsung-Heng Tsai [aut, cre], Olga Vitek [aut]
Bioconductor views DifferentialExpression MassSpectrometry Proteomics Software
MaintainerTsung-Heng Tsai <>
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))


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MSstatsPTM documentation built on Nov. 8, 2020, 5:49 p.m.