intcorDens: plot of density functions of integrative correlations
In MergeMaid: Merge Maid

Description Usage Arguments Details Value See Also Examples

Given a mergeExpressionSet, this function calculates and plots the density function of the approximate integrative correlations, as well as densities for the "null distributions" obtained by randomly permuting sample IDs.

1	intcorDens(x,method,...)

`x`	Object of class mergeExpressionSet.
`method`	The available method to use is "pearson".
`...`	Graphical parameters to be passed to plot.

Here we use the approximate method to calculate the integrative correlation.

The value is null. Returns a plot.

mergeExpressionSet-class,intCor,modelOutcome

  if(require(Biobase) & require(MASS)){
  data(mergeData)
  merged  <-mergeExprs(sample1,sample2,sample3)

  intcorDens(merged)

  intcorDens(merged,cex.legend=1.5)

  intcorDens(merged,lty=2)
  }