kda2cytoscape.colormap: Assign one color to each unique module
In Mergeomics: Integrative network analysis of omics data
Description
Usage
Arguments
Value
Author(s)
References
See Also
Examples
Description
kda2cytoscape.colormap takes number of the modules and assigns a
particular color to each module. Returns the color list (palette).
Usage
1
kda2cytoscape.colormap(ncolors)
Arguments
ncolors
number of the unique modules
Value
palette
color list: one color is assigned to each module
Author(s)
Zeyneb Kurt
References
Shu L, Zhao Y, Kurt Z, Byars SG, Tukiainen T, Kettunen J, Orozco LD,
Pellegrini M, Lusis AJ, Ripatti S, Zhang B, Inouye M, Makinen V-P, Yang X.
Mergeomics: multidimensional data integration to identify pathogenic
perturbations to biological systems. BMC genomics. 2016;17(1):874.
See Also
Examples
1
2
color.number = 5 ## let us assume we have 5 modules, assign 1 color to each:
palette <- kda2cytoscape.colormap(color.number)
Mergeomics documentation built on Nov. 8, 2020, 6:58 p.m.
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Description Usage Arguments Value Author(s) References See Also Examples
Description
kda2cytoscape.colormap takes number of the modules and assigns a
particular color to each module. Returns the color list (palette).
Usage
1 | kda2cytoscape.colormap(ncolors)
|
Arguments
ncolors |
number of the unique modules |
Value
palette |
color list: one color is assigned to each module |
Author(s)
Zeyneb Kurt
References
Shu L, Zhao Y, Kurt Z, Byars SG, Tukiainen T, Kettunen J, Orozco LD, Pellegrini M, Lusis AJ, Ripatti S, Zhang B, Inouye M, Makinen V-P, Yang X. Mergeomics: multidimensional data integration to identify pathogenic perturbations to biological systems. BMC genomics. 2016;17(1):874.
See Also
Examples
1 2 | color.number = 5 ## let us assume we have 5 modules, assign 1 color to each:
palette <- kda2cytoscape.colormap(color.number)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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