set2Frame: Combine cells in a flow set into a flow frame.
In MetaCyto: MetaCyto: A package for meta-analysis of cytometry data
Description
Usage
Arguments
Value
Examples
Description
A function that combines cells in a flow set into a flow frame.
Usage
1
set2Frame(flowSet)
Arguments
flowSet
A flow set object
Value
Returns a flowFrame object. All cells from flow set are combined into
one flow frame. A new parameter, sample_id, is introduced to indicate the
origin of each cell.
Examples
1
2
3
4
5
6
library(flowCore)
files=system.file("extdata","SDY420/ResultFiles/CyTOF_result",
package="MetaCyto")
files=list.files(files,pattern="fcs$",full.names=TRUE)
flow_set = read.flowSet(files)
flow_frame = set2Frame(flow_set)
Example output
MetaCyto documentation built on Nov. 8, 2020, 7:50 p.m.
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Description Usage Arguments Value Examples
Description
A function that combines cells in a flow set into a flow frame.
Usage
1 | set2Frame(flowSet)
|
Arguments
flowSet |
A flow set object |
Value
Returns a flowFrame object. All cells from flow set are combined into one flow frame. A new parameter, sample_id, is introduced to indicate the origin of each cell.
Examples
1 2 3 4 5 6 | library(flowCore)
files=system.file("extdata","SDY420/ResultFiles/CyTOF_result",
package="MetaCyto")
files=list.files(files,pattern="fcs$",full.names=TRUE)
flow_set = read.flowSet(files)
flow_frame = set2Frame(flow_set)
|
Example output
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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