API for MetaNeighbor
Single cell replicability analysis
| Global functions | |
|---|---|
| GOhuman | Man page |
| GOmouse | Man page |
| MN_rowVars | Source code |
| MetaNeighbor | Man page Source code |
| MetaNeighborUS | Man page Source code |
| MetaNeighborUSDefault | Source code |
| MetaNeighborUSLowMem | Source code |
| MetaNeighborUS_from_trained | Source code |
| aggregate_assay | Source code |
| color_graph | Source code |
| compute_1v1_aurocs | Source code |
| compute_aurocs | Source code |
| compute_votes | Source code |
| design_matrix | Source code |
| extendClusterSet | Man page Source code |
| extractMetaClusters | Man page Source code |
| extract_top_candidates | Source code |
| find_top_candidate | Source code |
| getCellType | Man page Source code |
| getStudyId | Man page Source code |
| gg_color | Source code |
| makeClusterGraph | Man page Source code |
| makeClusterName | Man page Source code |
| make_graph | Source code |
| make_vertex_colors | Source code |
| mergeSCE | Man page Source code |
| mn_data | Man page |
| na_matrix | Source code |
| neighborVoting | Man page |
| normalize_cols | Source code |
| order_rows_according_to_cols | Source code |
| order_sym_matrix | Source code |
| plotBPlot | Man page Source code |
| plotClusterGraph | Man page Source code |
| plotDotPlot | Man page Source code |
| plotHeatmap | Man page Source code |
| plotHeatmapPretrained | Man page Source code |
| plotMetaClusters | Man page Source code |
| plotUpset | Man page Source code |
| predict_and_score | Source code |
| scale_cols | Source code |
| scoreMetaClusters | Man page Source code |
| score_default | Source code |
| score_low_mem | Source code |
| splitClusters | Man page Source code |
| splitTestClusters | Man page Source code |
| splitTrainClusters | Man page Source code |
| standardizeLabel | Man page Source code |
| subsetClusterGraph | Man page Source code |
| topHits | Man page Source code |
| trainModel | Man page Source code |
| variableGenes | Man page Source code |
