Files in MetaNeighbor

Single cell replicability analysis

Documentation.md README.md

NAMESPACE

DESCRIPTION

LICENSE

build/vignette.rds

data/GOhuman.rda

data/GOmouse.RData

data/datalist

data/mn_data.RData

R/split_data.R R/topHits.R R/utility.R R/mn_data.R R/visualization.R R/GOhuman.R R/GOmouse.R R/MetaNeighbor.R R/variableGenes.R R/meta_clusters.R R/neighborVoting.R R/trainModel.R R/preprocessing.R R/graph_visualization.R R/MetaNeighborUS.R

vignettes/MetaNeighbor.bib

vignettes/MetaNeighbor.Rmd

vignettes/figures/MNUS_pancreas_2.png

vignettes/figures/MN_neurons.png

vignettes/figures/MNUS_neurons.png

vignettes/figures/coexp-schem.png

vignettes/figures/beanplot.png

vignettes/figures/MN_pancreas.png

vignettes/figures/heatmap.png

vignettes/figures/MNUS_pancreas_5.png

man/extendClusterSet.Rd man/mn_data.Rd man/getStudyId.Rd man/mergeSCE.Rd man/standardizeLabel.Rd man/MetaNeighbor.Rd man/subsetClusterGraph.Rd man/makeClusterName.Rd man/extractMetaClusters.Rd man/plotMetaClusters.Rd man/plotHeatmap.Rd man/plotClusterGraph.Rd man/plotDotPlot.Rd man/GOmouse.Rd man/getCellType.Rd man/splitTestClusters.Rd man/plotBPlot.Rd man/scoreMetaClusters.Rd man/neighborVoting.Rd man/plotUpset.Rd man/splitClusters.Rd man/GOhuman.Rd man/makeClusterGraph.Rd man/MetaNeighborUS.Rd man/plotHeatmapPretrained.Rd man/variableGenes.Rd man/trainModel.Rd man/splitTrainClusters.Rd man/topHits.Rd tests/testthat.R tests/testthat/test.R

inst/NEWS

inst/CITATION

inst/doc/MetaNeighbor.pdf inst/doc/MetaNeighbor.R inst/doc/MetaNeighbor.Rmd

MetaNeighbor documentation built on Nov. 8, 2020, 5:40 p.m.