Man pages for MultiDataSet
Implementation of MultiDataSet and ResultSet
| add_eset | Method to add an 'eSet' to 'MultiDataSet'. |
| add_genexp | Method to add an expression microarray dataset to... |
| add_methy | Method to add a slot of methylation to 'MultiDataSet'. |
| add_rnaseq-methods | Method to add an expression RNA seq dataset to... |
| add_rse | Method to add a 'RangedSummarizedExperiment' to... |
| add_se | Method to add a 'SummarizedExperiment' to 'MultiDataSet'. |
| add_snps | Method to add a slot of SNPs to 'MultiDataSet'. |
| add_table | Method to add a 'matrix' to 'MultiDataSet'. |
| chrNumToChar | Convert chr numbers to chr strings |
| commonIds | Get the name of the ids common to all datasets |
| commonSamples | Method to select samples that are present in all datasets. |
| getAssociation-methods | Method to extrat feature result from a ResultSet |
| lambdaClayton | Lambda Calculation for a vector of P-Values |
| mae2mds | Convert a 'MultiAssayExperiment' to a 'MultiDataSet' |
| mds2mae | Convert a 'MultiDataSet' to a 'MultiAssayExperiment' |
| MultiDataSet | MultiDataSet: Implementation of the BRGE's basic classes |
| MultiDataSet-class | MultiDataSet instances |
| opt-methods | Method to get the options sued to create the ResultSet |
| qq_plot | Function to draw a QQ Plot from a vector of numbers |
| ResultSet-class | Class ResultSet |
| rowRangesElements | Get the name of the datasets that have rowRanges |
| rset | Example 'ResultSet' |
| volcano_plot | Function to draw a Volcano Plot |
| w_iclusterplus | Apply iClusterPlus clustering method to a MultiDataSet object |
| w_mcia | Apply mcia integration method to a MultiDataSet object |
