Description Usage Arguments Value Examples
Homologous methods from limma
, getAssociation
resturns a
data.frame
with the logFC
and PValue
per
featrue for the selcted coef
and for given result (rid
).
1 | getAssociation(object, rid = 1, coef = 2, contrast = NULL, fNames = NULL, ...)
|
object |
A |
rid |
The name or index of the result to be extracted. |
coef |
(default |
contrast |
(default |
fNames |
(default |
... |
Further arguments passed to topTable |
A data.frame
with the result of the association study,
including P-Value and Fold Change.
1 2 | data(rset)
getAssociation(rset, rid=1, fNames = c("chromosome", "position"))
|
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