API for NGScopy
NGScopy: Detection of Copy Number Variations in Next Generation Sequencing sequencing
| Global functions | |
|---|---|
| .bound_end | Source code |
| .calc_cn | Source code |
| .calc_segm | Source code |
| .check.packages | Source code |
| .check_regions | Source code |
| .check_segmtype | Source code |
| .count_starts | Source code |
| .help_segmtype | Source code |
| .make_windows | Source code |
| .parse_mfrow | Source code |
| .parse_ref | Source code |
| .parse_scales | Source code |
| .parse_segmfunc | Source code |
| .parse_segmtype | Source code |
| .plot_out | Source code |
| .proc_segm | Source code |
| .ref_to_refid | Source code |
| .ref_to_reflength | Source code |
| .ref_to_reflength2 | Source code |
| .ref_to_refname | Source code |
| .ref_to_regions | Source code |
| .refid_to_refname | Source code |
| .refname_to_refid | Source code |
| .sort_regions | Source code |
| .trim_regions | Source code |
| .unit_plot_out | Source code |
| .unit_plot_segm | Source code |
| NGScopy | Man page |
| NGScopy-class | Man page |
| NGScopy-package | Man page |
| df.to.gr | Man page Source code |
| help_segmtype | Man page Source code |
| ngscopy_cmdline_example | Man page Source code |
| ngscopy_unittest | Man page Source code |
| parse_segmtype | Man page Source code |
| read_regions | Man page Source code |
| vconcat | Source code |
