Operating characteristics plus sample size and local fdr for microarray experiments

average.fdr | Average a two-dimensional local false discovery rate |

DrawContourlines | Draw and label a set of pre-calculated isolines |

EOC | Estimated or empirical FDR, sensitivity, etc as a function of... |

FDR | Compute FDR for general scenarios |

fdr1d | Compute classical local false discovery rate |

fdr2d | Compute two-dimensional local false discovery rate |

MAsim.smyth | Simulate two-sample microarray data |

OCshow | Show one ore several OC curves graphically |

plot.fdr1d.result | Plot univariate local false discovery output |

plot.fdr2d.result | Plotting the bivariate local false discovery results |

plot.FDR.result | Plot the empirical FDR as a function of the cutoff level |

samplesize | FDR as a function of sample size |

smooth1d | Smoothing a vector of counts |

summary.fdr.result | Display functions for local fdr output |

tMixture | Fit a mixture of t-distributions |

TOC | Theoretical FDR and sensitivity as a function of cutoff level |

tstatistics | Compute multiple parallel t-statistics |

Undocumented | Undocumented functions |

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