OmicCircos: High-quality circular visualization of omics data

OmicCircos is an R application and package for generating high-quality circular plots for omics data.

Install the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("OmicCircos")
AuthorYing Hu <yhu@mail.nih.gov> Chunhua Yan <yanch@mail.nih.gov>
Bioconductor views Annotation Statistics Visualization
Date of publicationNone
MaintainerYing Hu <yhu@mail.nih.gov>
LicenseGPL-2
Version1.14.0

View on Bioconductor

Files

DESCRIPTION
NAMESPACE
R
R/OmicCircos.R
build
build/vignette.rds
data
data/TCGA.BC.cnv.2k.60.RData
data/TCGA.BC.fus.RData
data/TCGA.BC.gene.exp.2k.60.RData
data/TCGA.BC.sample60.RData
data/TCGA.BC_Her2_cnv_exp.RData
data/TCGA.PAM50_genefu_hg18.RData
data/UCSC.chr.colors.RData
data/UCSC.hg18.RData
data/UCSC.hg18.chr.RData
data/UCSC.hg19.RData
data/UCSC.hg19.chr.RData
data/UCSC.mm10.RData
data/UCSC.mm10.chr.RData
data/UCSC.mm9.RData
data/UCSC.mm9.chr.RData
demo
demo/00Index
demo/OmicCircos4vignette1.R demo/OmicCircos4vignette10.R demo/OmicCircos4vignette2.R demo/OmicCircos4vignette3.R demo/OmicCircos4vignette4.R demo/OmicCircos4vignette5.R demo/OmicCircos4vignette6.R demo/OmicCircos4vignette7.R demo/OmicCircos4vignette8.R demo/OmicCircos4vignette9.R
inst
inst/doc
inst/doc/OmicCircos_vignette.R
inst/doc/OmicCircos_vignette.Rnw
inst/doc/OmicCircos_vignette.pdf
man
man/OmicCircos.Rd man/TCGA.BC.cnv.2k.60.Rd man/TCGA.BC.fus.Rd man/TCGA.BC.gene.exp.2k.60.Rd man/TCGA.BC.sample60.Rd man/TCGA.BC_Her2_cnv_exp.Rd man/TCGA.PAM50_genefu_hg18.Rd man/UCSC.chr.colors.Rd man/UCSC.hg18.Rd man/UCSC.hg18.chr.Rd man/UCSC.hg19.Rd man/UCSC.hg19.chr.Rd man/UCSC.mm10.Rd man/UCSC.mm10.chr.Rd man/UCSC.mm9.Rd man/UCSC.mm9.chr.Rd man/circos.Rd man/segAnglePo-methods.Rd man/segAnglePo.Rd man/sim.circos.Rd
vignettes
vignettes/OmicCircos_vignette.Rnw

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

Please suggest features or report bugs with the GitHub issue tracker.

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