Biocview "Statistics"

biobakery/ccrepe

ccrepe_and_nc.score

ccrepe

ccrepe_and_nc.score

ESEA

ESEA: Discovering the Dysregulated Pathways based on Edge Set Enrichment Analysis

hanjunwei-lab/ESEA

ESEA: Discovering the Dysregulated Pathways based on Edge Set Enrichment Analysis

glucpack

glucpack

OmicCircos

High-quality circular visualization of omics data

RGLab/HIV.db

HIV Annotation

SubpathwayGMir

Identify Metabolic Subpathways Mediated by MicroRNAs

SubpathwayLNCE

Identify Signal Subpathways Competitively Regulated by LncRNAs Based on ceRNA Theory

pooranis/maaslin

Maaslin

matrixStats

Methods that apply to rows and columns of a matrix

MiRSEA

'MicroRNA' Set Enrichment Analysis

hanjunwei-lab/MiRSEA

'MicroRNA' Set Enrichment Analysis

wolski/pairseqsim

pairwise sequence alignment similarity simple.

sRAP

Simplified RNA-Seq Analysis Pipeline

LncDM

The Different Methylation Sites, Elements and Regions of lncRNA

PAGI

The package can identify the dysregulated KEGG pathways based on global influence from the internal effect of pathways and crosstalk between pathways.

hanjunwei-lab/PAGI

The package can identify the dysregulated KEGG pathways based on global influence from the internal effect of pathways and crosstalk between pathways.

MPINet

The package can implement the network-based metabolite pathway identification of pathways.

meshr

Tools for conducting enrichment analysis of MeSH