MPINet: The package can implement the network-based metabolite pathway identification of pathways.

(1) Our system provides a network-based strategies for metabolite pathway identification.(2) The MPINet can support the identification of pathways using Hypergeometric test based on metabolite set. (3)MPINet can support pathways from multiple databases.

Install the latest version of this package by entering the following in R:
install.packages("MPINet")
AuthorYanjun Xu, Chunquan Li and Xia Li
Bioconductor views Annotation Networks Pathways Statistics metabolite
Date of publication2013-07-28 08:30:30
MaintainerYanjun Xu <tonghua605@163.com>
LicenseGPL (>= 2)
Version1.0

View on CRAN

Files

inst
inst/localdata
inst/localdata/prostate.txt
inst/doc
inst/doc/MPINet.pdf
inst/doc/MPINet.Rnw
inst/doc/MPINet.R
NAMESPACE
data
data/MPINetData.rda
R
R/performpcls.R R/identifypathway.R R/GetExampleData.R R/getPSS.R R/getEnvironmentData.R
vignettes
vignettes/MPINet.Rnw
MD5
DESCRIPTION
man
man/printGraph.Rd man/ExampleData.Rd man/getPSS.Rd man/MPINetData.Rd man/identifypathway.Rd man/MPEANet-internal.Rd man/GetExampleData.Rd

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

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