MPINet: The package can implement the network-based metabolite pathway identification of pathways.

(1) Our system provides a network-based strategies for metabolite pathway identification.(2) The MPINet can support the identification of pathways using Hypergeometric test based on metabolite set. (3)MPINet can support pathways from multiple databases.

AuthorYanjun Xu, Chunquan Li and Xia Li
Date of publication2013-07-28 08:30:30
MaintainerYanjun Xu <tonghua605@163.com>
LicenseGPL (>= 2)
Version1.0

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Files in this package

MPINet
MPINet/inst
MPINet/inst/localdata
MPINet/inst/localdata/prostate.txt
MPINet/inst/doc
MPINet/inst/doc/MPINet.pdf
MPINet/inst/doc/MPINet.Rnw
MPINet/inst/doc/MPINet.R
MPINet/NAMESPACE
MPINet/data
MPINet/data/MPINetData.rda
MPINet/R
MPINet/R/performpcls.R MPINet/R/identifypathway.R MPINet/R/GetExampleData.R MPINet/R/getPSS.R MPINet/R/getEnvironmentData.R
MPINet/vignettes
MPINet/vignettes/MPINet.Rnw
MPINet/MD5
MPINet/DESCRIPTION
MPINet/man
MPINet/man/printGraph.Rd MPINet/man/ExampleData.Rd MPINet/man/getPSS.Rd MPINet/man/MPINetData.Rd MPINet/man/identifypathway.Rd MPINet/man/MPEANet-internal.Rd MPINet/man/GetExampleData.Rd

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

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