LncDM: The Different Methylation Sites, Elements and Regions of lncRNA

The package can get the methylation matrix and identify the differential methylation sites,elements or the regions who are in the elements of lncRNA etc. This package gets a matrix of methylation values of the samples. Then it can calculate the methylation values of elements. This package uses linear and t test to identify the differential methylation or the sites,elements and regions that related with the phenotype.

Getting started

Package details

AuthorHui Zhi,Yanxun Su,Xin Li
Bioconductor views DMR LncRNA Methylation Statistics
MaintainerHui Zhi<zhihui013201@gmail.com>
Package repositoryView on R-Forge
Installation Install the latest version of this package by entering the following in R:
install.packages("LncDM", repos="http://R-Forge.R-project.org")

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LncDM documentation built on May 2, 2019, 6:09 p.m.