PGSEA: Parametric Gene Set Enrichment Analysis

Parametric Analysis of Gene Set Enrichment

Install the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("PGSEA")
AuthorKyle Furge <kyle.furge@vai.org> and Karl Dykema <karl.dykema@vai.org>
Bioconductor views Microarray
Date of publicationNone
MaintainerKarl Dykema <karl.dykema@vai.org>
LicenseGPL-2
Version1.48.0

View on Bioconductor

Files

DESCRIPTION
NAMESPACE
R
R/PGSEA.R
build
build/vignette.rds
data
data/GOLUBmcs.rda
data/VAIgsc.rda
data/VAImcs.rda
data/nbEset.rda
inst
inst/doc
inst/doc/PGSEA.R
inst/doc/PGSEA.Rnw
inst/doc/PGSEA.pdf
inst/doc/PGSEA2.R
inst/doc/PGSEA2.Rnw
inst/doc/PGSEA2.pdf
inst/extdata
inst/extdata/sample.gmt
man
man/GOLUBmcs.Rd man/PGSEA.Rd man/VAIgsc.Rd man/VAImcs.Rd man/aggregateExprs.Rd man/convertSmc.Rd man/editSmc.Rd man/go2smc.Rd man/kegg2smc.Rd man/nbEset.Rd man/readGmt.Rd man/readSmc.Rd man/scanSmc.Rd man/smcPlot.Rd man/writeGmt.Rd man/writeSmc.Rd
vignettes
vignettes/PGSEA.Rnw
vignettes/PGSEA2.Rnw

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