kegg2smc: KEGG pathway to "smc"

In PGSEA: Parametric Gene Set Enrichment Analysis

Description

This function creates "smc" objects from the "KEGG" Bioconductor library.

Usage

 kegg2smc(min = 1, max = 284,organism="human")

Arguments

min	numeric - minimum length of ids to be included
max	numeric - maximum length of ids to be included
organism	character - organism

Value

a list of "smc" objects

Author(s)

Karl Dykema <[e-mail]> and Richard Birnie <[e-mail]>

Examples

	if(require(KEGG.db)){
		mcs <- kegg2smc(min=20,max=284)
		length(mcs)
		str(mcs[[1]])
	}

PGSEA documentation built on April 28, 2020, 8:28 p.m.