PanVizGenerator: Generate PanViz visualisations from your pangenome

PanViz is a JavaScript based visualisation tool for functionaly annotated pangenomes. PanVizGenerator is a companion for PanViz that facilitates the necessary data preprocessing step necessary to create a working PanViz visualization. The output is fully self-contained so the recipient of the visualization does not need R or PanVizGenerator installed.

AuthorThomas Lin Pedersen
Date of publicationNone
MaintainerThomas Lin Pedersen <thomasp85@gmail.com>
LicenseGPL (>= 2)
Version1.2.0
https://github.com/thomasp85/PanVizGenerator

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Files in this package

PanVizGenerator/.travis.yml
PanVizGenerator/DESCRIPTION
PanVizGenerator/NAMESPACE
PanVizGenerator/NEWS
PanVizGenerator/R
PanVizGenerator/R/GO.R PanVizGenerator/R/IO.R PanVizGenerator/R/aaa.R PanVizGenerator/R/panviz.R PanVizGenerator/R/shinyStuff.R PanVizGenerator/R/zzz.R
PanVizGenerator/README.md
PanVizGenerator/build
PanVizGenerator/build/vignette.rds
PanVizGenerator/inst
PanVizGenerator/inst/PanViz
PanVizGenerator/inst/PanViz/PanViz.html
PanVizGenerator/inst/PanViz/README
PanVizGenerator/inst/PanViz/script.js
PanVizGenerator/inst/PanViz/style.css
PanVizGenerator/inst/doc
PanVizGenerator/inst/doc/panviz_howto.R
PanVizGenerator/inst/doc/panviz_howto.Rmd
PanVizGenerator/inst/doc/panviz_howto.html
PanVizGenerator/inst/extdata
PanVizGenerator/inst/extdata/exampleData.csv
PanVizGenerator/inst/server.R
PanVizGenerator/inst/shinyapps
PanVizGenerator/inst/shinyapps/thomas
PanVizGenerator/inst/www
PanVizGenerator/inst/www/code
PanVizGenerator/inst/www/code/scripts.js
PanVizGenerator/inst/www/index.html
PanVizGenerator/inst/www/media
PanVizGenerator/inst/www/media/GitHubLogo.svg
PanVizGenerator/inst/www/media/PanVizLogo1.svg
PanVizGenerator/inst/www/media/PanVizLogo2.svg
PanVizGenerator/inst/www/media/bugs.svg
PanVizGenerator/inst/www/media/goNav1.png
PanVizGenerator/inst/www/media/goNav2.png
PanVizGenerator/inst/www/media/goNav3.png
PanVizGenerator/inst/www/media/panvizDyn1.png
PanVizGenerator/inst/www/media/panvizDyn2.png
PanVizGenerator/inst/www/media/panvizDyn3.png
PanVizGenerator/inst/www/media/share.svg
PanVizGenerator/inst/www/media/strainCom1.png
PanVizGenerator/inst/www/media/strainCom2.png
PanVizGenerator/inst/www/media/visQuery1.png
PanVizGenerator/inst/www/media/visQuery2.png
PanVizGenerator/inst/www/media/visQuery3.png
PanVizGenerator/inst/www/media/visQuery4.png
PanVizGenerator/inst/www/style
PanVizGenerator/inst/www/style/styles.css
PanVizGenerator/man
PanVizGenerator/man/PanVizGenerator.Rd PanVizGenerator/man/getGO.Rd PanVizGenerator/man/panviz.Rd
PanVizGenerator/tests
PanVizGenerator/tests/testthat
PanVizGenerator/tests/testthat.R
PanVizGenerator/tests/testthat/test-GO.R
PanVizGenerator/tests/testthat/test-io.R
PanVizGenerator/tests/testthat/test-panviz.R
PanVizGenerator/vignettes
PanVizGenerator/vignettes/panviz_howto.Rmd
PanVizGenerator/vignettes/panvizgenerator.png

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