Files in PathwaySplice
An R Package for Unbiased Splicing Pathway Analysis

DESCRIPTION
README.md
NAMESPACE
inst/NEWS.Rd
inst/doc/tutorial.R inst/doc/tutorial.Rmd
inst/doc/tutorial.html
inst/bin/R_manager.r inst/bin/Make_an_example_data_set.r inst/bin/Draw_PCA_4_checking.r inst/bin/MakeExample.r inst/bin/test.r
inst/bin/R_manager.sh
inst/bin/Cp.r
inst/bin/processGtf.sh
inst/bin/Simple.r
inst/bin/BioCheck_PathwaySplice.sh
inst/bin/Make_A_Venn.r
inst/bin/Select_rows_of_files_randomly.sh
inst/bin/AnalysisScript.r inst/bin/install_required_packages.r
inst/extdata/h.all.v6.0.symbols.gmt.txt
inst/extdata/kegg.gmt.txt
inst/extdata/AllGeneTable.rds
inst/extdata/Sample_info.txt
inst/extdata/SRR1660318_chr22/Counts.10.genes.txt
inst/extdata/SRR1660313_chr22/Counts.10.genes.txt
inst/extdata/SRR1660308_chr22/Counts.10.genes.txt
inst/extdata/SRR1660312_chr22/Counts.10.genes.txt
inst/extdata/GTF_Files/flat.chr22.10.genes.gff
inst/extdata/SRR1660311_chr22/Counts.10.genes.txt
inst/extdata/SRR1660316_chr22/Counts.10.genes.txt
inst/extdata/SRR1660315_chr22/Counts.10.genes.txt
inst/extdata/SRR1660310_chr22/Counts.10.genes.txt
inst/extdata/SRR1660314_chr22/Counts.10.genes.txt
inst/extdata/SRR1660319_chr22/Counts.10.genes.txt
inst/extdata/SRR1660317_chr22/Counts.10.genes.txt
vignettes/venn.png
vignettes/Splicing-network.bib
vignettes/boxplot.png
vignettes/res.hyper.Wall.Sampling.RData
vignettes/comparison.png
vignettes/tutorial.Rmd
vignettes/parameterTuning.png
R/zzz.R R/Run_pathwaysplice.R R/Doc4Data.R man/makeGeneTable.Rd man/outKegg2Gmt.Rd man/lrTestBias.Rd man/enrichmentMap.Rd man/runPathwaySplice.Rd man/featureBasedData.Rd man/gmtGene2Cat.Rd man/compareResults.Rd
build/vignette.rds
tests/testthat.R tests/testthat/test-Run_pathwaysplice.R
data/datalist
data/featureBasedData.RData
PathwaySplice documentation built on May 2, 2018, 2:43 a.m.