API for QUALIFIER
Quality Control of Gated Flow Cytometry Experiments
| Global functions | |
|---|---|
| .TubeNameMapping | Source code |
| .addStats | Source code |
| .argParser | Source code |
| .getQAStats.env | Source code |
| .getQAStats.gh | Source code |
| .isRoot | Source code |
| .matchNode | Source code |
| .parseTubeID | Source code |
| .postProcessSVG | Source code |
| .qaCheck | Source code |
| .qaCheck.main | Source code |
| .queryStats | Source code |
| .read.qaTask | Source code |
| .setupPlotTheme | Source code |
| .timelineplot | Source code |
| .writeHead | Source code |
| ITNQASTUDY | Man page |
| QUALIFIER | Man page |
| QUALIFIER-package | Man page |
| applyFunc | Source code |
| clearCheck | Man page Source code |
| createDbSchema | Source code |
| db | Man page |
| description,qaTask | Man page |
| formula,qaTask | Man page |
| getData,qaTask | Man page |
| getName,qaTask | Man page |
| getPop,qaTask | Man page |
| getQAStats | Man page |
| getQAStats,GatingHierarchy-method | Man page |
| getQAStats,GatingSet-method | Man page |
| getQAStats,GatingSetList-method | Man page |
| getQAStats,environment-method | Man page |
| getQAStats-methods | Man page |
| highlight | Man page |
| highlight,qaTask-method | Man page |
| highlight<- | Man page |
| highlight<-,qaTask,character-method | Man page |
| htmlReport | Man page |
| htmlReport,qaTask-method | Man page |
| htmlReport<- | Man page |
| htmlReport<-,qaTask,logical-method | Man page |
| initDB | Man page Source code |
| load_db | Man page Source code |
| makeQaTask | Source code |
| matchStatType | Source code |
| outlier.cutoff | Man page Source code |
| outlier.norm | Man page |
| outlier.t | Man page |
| outlierDetection | Source code |
| outlierFunctions | Man page |
| panel.bwplotEx | Source code |
| panel.xyplot.flowsetEx | Source code |
| panel.xyplot.qa | Source code |
| panel.xyplotEx | Source code |
| plot | Man page |
| plot,qaTask,ANY-method | Man page |
| plot,qaTask-method | Man page |
| plot-methods | Man page |
| plot.qaTask | Source code |
| plot.trellisEx | Source code |
| plotType,qaTask | Man page |
| proportion.outliers.mle | Man page |
| proportion.outliers.robust | Man page |
| qa.GroupPlot | Source code |
| qaCheck | Man page |
| qaCheck,qaTask-method | Man page |
| qaCheck-methods | Man page |
| qaCheckList | Man page |
| qaID,qaTask | Man page |
| qaLevel,qaTask | Man page |
| qaPreprocess | Man page Source code |
| qaReport | Man page |
| qaReport,list-method | Man page |
| qaReport,qaTask-method | Man page |
| qaReport-methods | Man page |
| qaTask | Man page |
| qaTask-class | Man page |
| qaWrite.list | Source code |
| qaWrite.summary | Source code |
| qaWrite.task | Source code |
| qoutlier | Man page |
| qpar | Man page |
| qpar,qaTask-method | Man page |
| qpar<- | Man page |
| qpar<-,qaTask,list-method | Man page |
| queryStats | Man page |
| queryStats,qaTask-method | Man page |
| rFunc | Man page |
| rFunc,qaTask-method | Man page |
| rFunc<- | Man page |
| rFunc<-,qaTask,ANY-method | Man page |
| rFunc<-,qaTask-method | Man page |
| reScaleData | Source code |
| read.qaTask | Man page Source code |
| rlm | Man page |
| saveToDB | Man page Source code |
| save_db | Man page Source code |
| scatterPar | Man page |
| scatterPar,qaTask-method | Man page |
| scatterPar<- | Man page |
| scatterPar<-,qaTask,list-method | Man page |
| show,qaTask | Man page |
| stripEx | Source code |
| tubesevents | Man page |
