read.qaTask: Loading 'qaTask's from a csv file

In QUALIFIER: Quality Control of Gated Flow Cytometry Experiments

Description

The csv file contains the definition of one qaTasks

Usage

read.qaTask(checkListFile, ...)

Arguments

checkListFile	A character scalar giving the file path, which is a csv spreadsheet contains the detailed information of each QA task. It should have the columns: 'qaID', 'qaName', 'description', 'qaLevel','pop', 'type', 'formula', 'subset', 'plotType'. See the slots of qaTask-class for more details.
...	other arguments db environment See the slots of qaTask-class for more details.

Value

a list of qaTask objects

Examples

## Not run: 
 checkListFile <- file.path(system.file("data", package = "QUALIFIER"), "qaCheckList.csv.gz")
 qaTask.list <- read.qaTask(db, checkListFile)
 qaTask.list[[1]]

## End(Not run)

QUALIFIER documentation built on Oct. 31, 2019, 3:24 a.m.