survData: Survial data of 82 patients

In RCASPAR: A package for survival time prediction based on a piecewise baseline hazard Cox regression model.

Description

A dataframe ”survData:" A dataframe containing the survival information of the 82 patients the relevant columns of which are "True_STs", "censored" indicating the recorded survival times of the patients, and their censorship status simultaneously. In the "censored" column "0" indicates a non-censored patient, and "1" indicates a censored patient\

Usage

data(survData)

Format

A data frame with 82 observations on the following 10 variables.

Array.ID

The array IDs of the patients

Sample.ID.Bauke.

The array IDs of the patients as annotated in one source

Experiment.Jon.

The array IDs of the patients as annotated in a third source (in essence the same as the previous two)

ExptID

The Experiment ID

Order

The number/order of the patient

Overall.survival..mons.undivided

the overall survival time of the patients in months

Relapse.free.survival..mons.

the relapse free survival time of the patients in months

Status.0.A..1.AWD..2.DOD..3.DOC

the status of the tumour (as abbreviated in the publication)

censored

the status of censorship with ”0" corresponding to a ”non-censored" patient and ”1" to a ”censored patient"

True_STs

The survival/censorship times of the patient in years

Details

A subset of the data set used in Bergamaschi, A., & al., e. (2006). Distinct Patterns of DNA Copy NumberAlteration are associated with different clinicopathological features and gene expression subtypes of breast cancer. Genes, Chromosomes and cancer , 45, 1033-1040.

Source

Bergamaschi, A., & al., e. (2006). Distinct Patterns of DNA Copy NumberAlteration are associated with different clinicopathological features and gene expression subtypes of breast cancer. Genes, Chromosomes and cancer , 45, 1033-1040.

References

Bergamaschi, A., & al., e. (2006). Distinct Patterns of DNA Copy NumberAlteration are associated with different clinicopathological features and gene expression subtypes of breast cancer. Genes, Chromosomes and cancer , 45, 1033-1040.

Examples

data(survData)
colnames(survData)

RCASPAR documentation built on Nov. 8, 2020, 6:56 p.m.