RIPSeeker: RIPSeeker: a statistical package for identifying protein-associated transcripts from RIP-seq experiments
Version 1.16.0

Infer and discriminate RIP peaks from RIP-seq alignments using two-state HMM with negative binomial emission probability. While RIPSeeker is specifically tailored for RIP-seq data analysis, it also provides a suite of bioinformatics tools integrated within this self-contained software package comprehensively addressing issues ranging from post-alignments processing to visualization and annotation.

Package details

AuthorYue Li
Bioconductor views RIPSeq Sequencing
MaintainerYue Li <yueli@cs.toronto.edu>
LicenseGPL-2
Version1.16.0
URL http://www.cs.utoronto.ca/~yueli/software.html
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("RIPSeeker")

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RIPSeeker documentation built on May 31, 2017, 3:24 p.m.