Man pages for RITAN
Rapid Integration of Term Annotation and Network resources
| as.graph | as.graph |
| check_any_net_input | check_any_net_input |
| check_net_input | check_net_input |
| cov_undirected | cov_undirected function to show the un-directed coverabe... |
| enrichment_symbols | enrichment_symbols |
| geneset_overlap | geneset_overlap |
| icon_single_within | icon_single_within interconnectivity score within a network |
| icon_test | icon_test |
| load_all_protein_coding_symbols | load_all_protein_coding_symbols |
| load_geneset_symbols | load_geneset_symbols |
| network_overlap | network_overlap |
| plot.term_enrichment | plot.term_enrichment |
| plot.term_enrichment_by_subset | plot.term_enrichment_by_subset |
| readGMT | readGMT |
| readSIF | readSIF |
| resource_reduce | resource_reduce Merge terms across resources to reduce the... |
| show_active_genesets_hist | show_active_genesets_hist |
| summary.term_enrichment | summary.term_enrichment |
| summary.term_enrichment_by_subset | summary.term_enrichment_by_subset |
| term_enrichment | term_enrichment |
| term_enrichment_by_subset | term_enrichment_by_subset |
| vac1.day0vs31.de.genes | This dataset is included as an example in the package: |
| vac1.day0vs56.de.genes | This dataset is included as an example in the package: |
| vac2.day0vs31.de.genes | This dataset is included as an example in the package: |
| vac2.day0vs56.de.genes | This dataset is included as an example in the package: |
| writeGMT | writeGMT |
| write_simple_table | write_simple_table |
