Man pages for RITAN
Rapid Integration of Term Annotation and Network resources

as.graphas.graph
check_any_net_inputcheck_any_net_input
check_net_inputcheck_net_input
cov_undirectedcov_undirected function to show the un-directed coverabe...
enrichment_symbolsenrichment_symbols
geneset_overlapgeneset_overlap
icon_single_withinicon_single_within interconnectivity score within a network
icon_testicon_test
load_all_protein_coding_symbolsload_all_protein_coding_symbols
load_geneset_symbolsload_geneset_symbols
network_overlapnetwork_overlap
plot.term_enrichmentplot.term_enrichment
plot.term_enrichment_by_subsetplot.term_enrichment_by_subset
readGMTreadGMT
readSIFreadSIF
resource_reduceresource_reduce Merge terms across resources to reduce the...
show_active_genesets_histshow_active_genesets_hist
summary.term_enrichmentsummary.term_enrichment
summary.term_enrichment_by_subsetsummary.term_enrichment_by_subset
term_enrichmentterm_enrichment
term_enrichment_by_subsetterm_enrichment_by_subset
vac1.day0vs31.de.genesThis dataset is included as an example in the package:
vac1.day0vs56.de.genesThis dataset is included as an example in the package:
vac2.day0vs31.de.genesThis dataset is included as an example in the package:
vac2.day0vs56.de.genesThis dataset is included as an example in the package:
writeGMTwriteGMT
write_simple_tablewrite_simple_table
RITAN documentation built on Nov. 8, 2020, 8:16 p.m.