RMAPPER: R interface to the MAPPER database of transcription factor binding sites

The RMAPPER package allows you to retrieve a set of predicted transcription factor binding sites from the MAPPER database (http://genome.ufl.edu/mapper/) through a simple HTTP request.

Author
VJ Carey <stvjc@channing.harvard.edu>
Date of publication
None
Maintainer
Heike Sichtig <hsichtig@ufl.edu>, Alberto Riva <ariva@ufl.edu>
License
Artistic 2.0
Version
1.14.0

View on Bioconductor

Man pages

hits
Hits details
mapperHits-class
Class "mapperHits" - holds collection of hits from MAPPER
query
Character string that provides information on the query...
readMapper
Retrieve a set of predicted transcription factor binding...
rmapperFactorTable
MAPPER Factor Table
rmapperHelp
Help

Files in this package

RMAPPER/DESCRIPTION
RMAPPER/NAMESPACE
RMAPPER/R
RMAPPER/R/allsrc.R
RMAPPER/build
RMAPPER/build/vignette.rds
RMAPPER/inst
RMAPPER/inst/doc
RMAPPER/inst/doc/readMAPPER.R
RMAPPER/inst/doc/readMAPPER.Rnw
RMAPPER/inst/doc/readMAPPER.pdf
RMAPPER/man
RMAPPER/man/hits.Rd
RMAPPER/man/mapperHits-class.Rd
RMAPPER/man/query.Rd
RMAPPER/man/readMapper.Rd
RMAPPER/man/rmapperFactorTable.Rd
RMAPPER/man/rmapperHelp.Rd
RMAPPER/vignettes
RMAPPER/vignettes/readMAPPER.Rnw