RmbDefaultSettings: RMassBank settings

Description Usage Arguments Details Value Note Author(s) See Also Examples

View source: R/settings_example.R

Description

Load, set and reset settings for RMassBank.

Usage

1
2
3
4
5
6
7

Arguments

file_or_list

The file (YML or R format) or R list with the settings to load.

target

The path where the template setting file should be stored.

env

The environment to load the settings from.

Details

RmbSettingsTemplate creates a template file in which you can adjust the settings as you like. Before using RMassBank, you must then load the settings file using loadRmbSettings. RmbDefaultSettings loads the default settings. loadRmbSettingsFromEnv loads the settings stored in env$RmbSettings, which is useful when reloading archives with saved settings inside.

Note: no settings are loaded upon loading MassBank! This is intended, so that one never forgets to load the correct settings.

The settings are described in RmbSettings.

Value

None.

Note

The default settings will not work for you unless you have, by chance, installed OpenBabel into the same directory as I have!

Author(s)

Michael Stravs

See Also

RmbSettings

Examples

1
2
3
4
 # Create a standard settings file and load it (unedited)
	RmbSettingsTemplate("mysettings.ini")
 loadRmbSettings("mysettings.ini")
 unlink("mysettings.ini")

RMassBank documentation built on Nov. 8, 2020, 6:06 p.m.