plotRecalibration: Plot the recalibration graph.

In RMassBank: Workflow to process tandem MS files and build MassBank records

Description

Plot the recalibration graph.

Usage

plotRecalibration(w, recalibrateBy = getOption("RMassBank")$recalibrateBy)

		plotRecalibration.direct(rcdata, rc, rc.ms1, title, mzrange,
		recalibrateBy = getOption("RMassBank")$recalibrateBy)

Arguments

w	The workspace to plot the calibration graph from
recalibrateBy	Whether recalibration was done by ppm ("ppm") or by m/z ("mz"). Important only for graph labeling here.
rcdata	A data frame with columns recalfield and mzFound.
rc	Predictor for MS2 data
rc.ms1	Predictor for MS1 data
title	Prefix for the graph titles
mzrange	m/z value range for the graph

Author(s)

Michele Stravs, Eawag <[e-mail]>

RMassBank documentation built on Nov. 8, 2020, 6:06 p.m.